rs52576904 SNP Detail

Summary

• ID
  rs52576904
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:47582549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCCC TTACCCCAGC CCCATTGCTG
  M
  GGCTGCTACT GTTGTTGCTG CTGCT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss136436907	ENSMUSSNP3677948	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss322947650	CHEV_9_47479334	CHEVERUD	SCREENING_POP	f	SNP			A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs52576904					SNP	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:47582549 () rs orientation: forward

Symbol	Name	Function Class
Cadm1	cell adhesion molecule 1	within coordinates
Rr209331	regulatory region 209331	52 bp proximal