rs52586290 SNP Detail

Summary

• ID
  rs52586290
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45024612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GTGGCTCACA ACCACCTGTA ATGGGATCCT ATACCCTCTT
  CTGGAATGTC TGAAGAGCAC AGGGTACTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTAT
  C
  TATATATATA TATATATATA TATATATATA TATAGTGAGA GAGAGAGAAA AGTACACATC
  TTGAAGGCAA ACAGTATGAT GGTTCTAATT GGGAGGGGAA G                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss149134171	ENSMUSSNP1498280	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52586290					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45024612 () rs orientation: forward

Symbol	Name	Function Class
Snrnp70	small nuclear ribonucleoprotein 70 (U1)	1265 bp downstream
Tssr66520	transcription start site region 66520	1982 bp upstream