rs52610421 SNP Detail

Summary

• ID
  rs52610421
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:189724466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTAA TGGAGGGAGA GGAAGGCAAC
  G
  CCTGCAAACA GTCCTCTGAA CTAGG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146493564	ENSMUSSNP6659130	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52610421					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189724466 () rs orientation: forward

Symbol	Name	Function Class
Gm69432	predicted gene, 69432	1981 bp upstream
Gm70453	predicted gene, 70453	1211 bp upstream
Rr425897	regulatory region 425897	1992 bp distal
Rr425898	regulatory region 425898	1834 bp distal