rs52617320 SNP Detail

Summary

• ID
  rs52617320
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:101454994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGAGTTCAT GTGTTTTTTC TTATCAAAGG ATCAGAACCA
  CTCCCTACAT ACATATATAG ATATTATATA TACAGTGTGT GTGTGTGTGT GTGTGTGTGT
  G
  TGTGTGTGTG TGTGTGTGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG
  AGAGAGAGAG AGTGATTTTA GCATAGACTG GAAATTTGC                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145046142	ENSMUSSNP843056	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52617320					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:101454994 () rs orientation: forward

Symbol	Name	Function Class
Gm57575	predicted gene, 57575	743 bp upstream
Gm70454	predicted gene, 70454	within coordinates