rs52620097 SNP Detail

Summary

• ID
  rs52620097
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:76127787 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAA GCCATGTAAA GCTGGAGTAT
  A
  TGATTAGAAG GTGTGAGGGC CTGAT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss139752761	ENSMUSSNP2494007	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52620097					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:76127787 () rs orientation: forward

Symbol	Name	Function Class
Gm52138	predicted gene, 52138	1969 bp upstream
Gm62917	predicted gene, 62917	within coordinates
Rr296309	regulatory region 296309	1729 bp proximal