rs52620659 SNP Detail

Summary

• ID
  rs52620659
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:71368626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCAG ACAGGGTTTC TCTGTGTAGC
  C
  CTAGCTGTCT TGGAACTCAC TCTGT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss137871005	ENSMUSSNP5468102	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss324091300	CHEV_12_72422839	CHEVERUD	SCREENING_POP	f	SNP		C	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs52620659					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:71368626 () rs orientation: forward

Symbol	Name	Function Class
4930474H06Rik	RIKEN cDNA 4930474H06 gene	166 bp upstream
Dact1	dishevelled-binding antagonist of beta-catenin 1	1745 bp downstream
Rr267972	regulatory region 267972	575 bp proximal