rs52624964 SNP Detail

Summary

• ID
  rs52624964
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:51341624 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTT AGTCCACTAG CACAGGAGAG
  A
  AGAGGAGAGG AGAGGAGAGG AGAGG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324621061	CHEV_14_51723842	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs52624964					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:51341624 () rs orientation: forward

Symbol	Name	Function Class
Rnase4	ribonuclease, RNase A family 4	within coordinates
Rr288976	regulatory region 288976	224 bp distal
Rr288977	regulatory region 288977	777 bp proximal
Rr299307	regulatory region 299307	433 bp distal
Tssr125402	transcription start site region 125402	707 bp upstream
Tssr125403	transcription start site region 125403	783 bp upstream
Tssr125404	transcription start site region 125404	996 bp upstream
Tssr125405	transcription start site region 125405	1161 bp upstream
Tssr125406	transcription start site region 125406	1245 bp upstream
Tssr128409	transcription start site region 128409	1209 bp downstream
Tssr128410	transcription start site region 128410	1246 bp downstream