rs52632797 SNP Detail

Summary

• ID
  rs52632797
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185415275 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GCACACATGT GCTCACATTC ACACGGGTGA ATGAACATGC
  ATAGTCGTGC ATACACACAC ACACACACAC ACACACACAC ACGCACACGC ACACGCACAT
  R
  CACACTCGCG CACACACACA CACACACACA CACACACGCA CGCACGCACA CACGCTCTCA
  CACACACAGA GCACACACAG AAAGGATGCT CTCTTGTAGA G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146440011	ENSMUSSNP5008769	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52632797					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185415275 () rs orientation: forward

Symbol	Name	Function Class
Rr425420	regulatory region 425420	518 bp distal
Rr425421	regulatory region 425421	970 bp distal
Rr425422	regulatory region 425422	1720 bp proximal
Rr425423	regulatory region 425423	1908 bp proximal