rs52633464 SNP Detail

Summary

• ID
  rs52633464
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:80072446 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TCCCAGCCAC CACATGGTGG CTCACAGCCA TCTGTAACGG
  CATCTGATGC CCTCTTCTGG GGTGTCTGAA GACAGCTACA GTGTACTCAT ATACAAAAAA
  W
  AAAAAAAAAT AATAATAATA ATTCTTTACT TTAAAAGAGA GAGAGAGAGC GAGAGAGATT
  CTCCAAACTG TAGAGGTTAG TCAAAGGGAA GGGGTAAAGG A                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss132448937	ENSMUSSNP2730059	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs52633464					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:80072446 () rs orientation: forward

Symbol	Name	Function Class
D11Bhm113	DNA segment, Chr 11, Boehm 113	547 bp distal
Rr386348	regulatory region 386348	within coordinates
Rr452448	regulatory region 452448	1769 bp distal
Rr452449	regulatory region 452449	36 bp distal
Rr452450	regulatory region 452450	1741 bp proximal
Rr452451	regulatory region 452451	1748 bp proximal
Rr452452	regulatory region 452452	1935 bp proximal