rs52637325 SNP Detail

Summary

• ID
  rs52637325
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161627392 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGGCAGACA TGGTGCTGGA GATGTAGCCA AGAGCTAGCT
  ACATCCTAAT CCATGCGCAG AGAAAGAGGA GGGAGAAAGA CAGGGATAGG CAGAGACACA
  S
  AGAGAGAGAG AGGAGACAAA CAGACAGACA GACTCTGAAC TTGGCATGAG CTTTTGAAAC
  CTCAATGCCT ACCCCCAGTA ACACACTTCC TCCAAAAAA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145922742	ENSMUSSNP3386224	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52637325					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161627392 () rs orientation: forward

Symbol	Name	Function Class
Rr421849	regulatory region 421849	557 bp distal
Rr421850	regulatory region 421850	22 bp proximal
Rr421851	regulatory region 421851	1571 bp proximal