rs52637438 SNP Detail

Summary

• ID
  rs52637438
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:3878408 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTCTGAGAG ACCTAGGATA CAAGATCAGC GTCTTGTCAA
  AAATTAAGTG TCCATAGGGG TTTGGTTTTT GTTTTGTTGT TTTGTTTTTG TTTTTAGTTT
  W
  GTTGTTGTTG TTTTGTTTTG TTTTTCTTTT GGATCGTTGA TTCAATCCCA TTGACCAACC
  TGTTTGCTTT TATGGTAATA GCATAGAGTT TTTATTACT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss148461555	ENSMUSSNP5063819	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52637438					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:3878408 () rs orientation: forward

Symbol	Name	Function Class
Rr370728	regulatory region 370728	within coordinates