rs52640072 SNP Detail

Summary

• ID
  rs52640072
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:94069631 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCATCAGA CACCAGGGAG
  CTCTGCTTCC CAAACTCAAG ATGGTGTTGC TGCTCAAAGG TGGGAAAGTC CAAGGAGGAG
  GAAGAGGTTG CTGTTGAAAC AAGAGTTAAG GCCCCTTTAA TCCCCGCTCG GAGGAGCGTT
  AAGGAAATAG AACAGCTGGG ACTGCACACC TGCTGAGCTT GTGTTAGTCC CTCAACACAC
  T
  CACATGCACA CACGGACACA CACATACACA CATCTCAAAC ACACACAGCA TACATCACAG
  AAACATACCA CATACACATA CCCCCCACAT ATACCATACT AGGTATACCA CCACCATACA
  TACCCATTTA CCATACATAC ACCATGTATA CACAACACAG ATGCAACATA CACATATACA
  TACCATACAC ACACCACACA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss132635164	ENSMUSSNP518465	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss323812225	CHEV_11_94040119	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs52640072					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:94069631 () rs orientation: forward

Symbol	Name	Function Class
Tssr110134	transcription start site region 110134	1514 bp downstream