rs52645032 SNP Detail

Summary

• ID
  rs52645032
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:23708118 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TTCTTTCACT GAGAAGAATC CAAGTACAAA CACATAGAGT
  TATAGCAAGC ATATCTCTCT CTCTCTCCCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT
  C
  TATATATATA TATATATATA TATACGTCAA GATTTCCCTT TAGCTAATTG CATGAAGAAA
  CTATTAACCA CAGCTTCCTC CAGATTCTTA CAGCCTAACA C                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148805711	ENSMUSSNP4389619	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	A/J
rs52645032					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:23708118 () rs orientation: forward

Symbol	Name	Function Class
Gm61424	predicted gene, 61424	1332 bp downstream
n-TSgct4	nuclear encoded tRNA serine 4 (anticodon GCT)	1997 bp downstream
Rr271078	regulatory region 271078	483 bp proximal
Rr281117	regulatory region 281117	1717 bp distal
Rr281118	regulatory region 281118	882 bp proximal
Rr281119	regulatory region 281119	1682 bp proximal