rs52658701 SNP Detail

Summary

• ID
  rs52658701
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:66804520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T ATATATATAT ATATATATAT ATATATATAT GTATATATGT
  ATGTATATAC ATATGTATAT ATGTATATAT ATGTGTATAT GTGTATATAT ATGTATATAT
  R
  TGTATATATG TATATATGTA TATATATATG TATATATATA TACACATACA TATACACACA
  CTCTCTATCA GATCTGTAAT TGGTAAAATT GTCTTTTCCC A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147337299	ENSMUSSNP1770485	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52658701					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:66804520 () rs orientation: forward

Symbol	Name	Function Class
Gm22219	predicted gene, 22219	763 bp upstream
Gm30190	predicted gene, 30190	1565 bp downstream