rs52670254 SNP Detail

Summary

• ID
  rs52670254
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:12217745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAG ACAGGGTTTC TCTGTGTAGC
  C
  CTGGCTGTCC TAGAACTCAC TTTGT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss147080802	ENSMUSSNP3402453	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs52670254					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:12217745 () rs orientation: forward

Symbol	Name	Function Class
D15Mit1005	DNA segment, Chr 15, Massachusetts Institute of Technology 1005	659 bp proximal
D15Mit1006	DNA segment, Chr 15, Massachusetts Institute of Technology 1006	523 bp proximal
Mtmr12	myotubularin related protein 12	within coordinates