rs52694197 SNP Detail

Summary

• ID
  rs52694197
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:39676417 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGT AAAATAAATA AATAAATAAA
  Y
  AAACAAACAA ACAAACAGGA AAAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147674355	ENSMUSSNP7220889	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52694197					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:39676417 () rs orientation: forward

Symbol	Name	Function Class
Dpys	dihydropyrimidinase	within coordinates
Gm16291	predicted gene 16291	644 bp downstream
Gm62327	predicted gene, 62327	363 bp upstream
Rr302762	regulatory region 302762	1384 bp proximal
Rr309646	regulatory region 309646	1109 bp distal