GGAGG AGGAGGAGGA GGAGGAGGAG G AGGAGGAGGC TGGAACCCTG GTTGC G = G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BTBR T<+> Itpr3 |
BUB/BnJ |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10SnJ |
CAST/EiJ |
CE/J |
CZECHII/EiJ |
DBA/2J |
FVB/NJ |
I/LnJ |
JF1/MsJ |
KK/HlJ |
LG/J |
LP/J |
MA/MyJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZO/HlLtJ |
PL/J |
PWK/PhJ |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
SJL/J |
SM/J |
SWR/J |
WSB/EiJ |
ZALENDE/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss925428904 | MGP_WTSI_14_46883958_mm38 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G |
SNP Consensus Information | |||||||||||||||||||||||||||||||||||||||||
SNP | Consensus Type | A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BTBR T<+> Itpr3 |
BUB/BnJ |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10SnJ |
CAST/EiJ |
CE/J |
CZECHII/EiJ |
DBA/2J |
FVB/NJ |
I/LnJ |
JF1/MsJ |
KK/HlJ |
LG/J |
LP/J |
MA/MyJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZO/HlLtJ |
PL/J |
PWK/PhJ |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
SJL/J |
SM/J |
SWR/J |
WSB/EiJ |
ZALENDE/EiJ |
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rs579507281 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss925428904 | MGP_WTSI_14_46883958_mm38 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | A/G |
Location: Chr14:47121415 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
2810457G06Rik | RIKEN cDNA 2810457G06 gene | within coordinates | ||||||
Cpgi6376 | CpG island 6376 | within coordinates | ||||||
Gm34934 | predicted gene, 34934 | 1240 bp upstream | ||||||
Rr297079 | regulatory region 297079 | within coordinates | ||||||
Samd4 | sterile alpha motif domain containing 4 | within coordinates | ||||||
Tssr4382 | transcription start site region 4382 | 72 bp upstream | ||||||
Tssr125240 | transcription start site region 125240 | 1022 bp downstream | ||||||
Tssr125241 | transcription start site region 125241 | 985 bp downstream | ||||||
Tssr125242 | transcription start site region 125242 | 959 bp downstream | ||||||
Tssr125243 | transcription start site region 125243 | 618 bp upstream | ||||||
Tssr128301 | transcription start site region 128301 | 1029 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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