CTTCC TTCCTTCCTT CCTTCCTTCC C TCCTTCCCTC CCTCCCTCCC TCCCT C = C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10SnJ |
C57BR/cdJ |
CBA/J |
CE/J |
FVB/NJ |
KK/HlJ |
LEWES/EiJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZO/HlLtJ |
QSi3/Ianm |
RIIIS/J |
SEA/GnJ |
ST/bJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss922852926 | MGP_WTSI_15_62138327 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C |
SNP Consensus Information | ||||||||||||||||||||||||||
SNP | Consensus Type | A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10SnJ |
C57BR/cdJ |
CBA/J |
CE/J |
FVB/NJ |
KK/HlJ |
LEWES/EiJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZO/HlLtJ |
QSi3/Ianm |
RIIIS/J |
SEA/GnJ |
ST/bJ |
||||
rs579598309 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss922852926 | MGP_WTSI_15_62138327 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | C/T |
Location: Chr15:62010176 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Pvt1 | Pvt1 oncogene | within coordinates | ||||||
Rr303301 | regulatory region 303301 | 776 bp distal | ||||||
Rr313892 | regulatory region 313892 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 12/17/2024 MGI 6.24 |
![]() |
|