rs579774994 SNP Detail

Summary

• ID
  rs579774994
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:62933330 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCT TCTTCTTCTT CCCTTCTCCT
  T
  CTTCTCCTCC TTCTCCTCCT TCTCC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CBA/J	DBA/2J	I/LnJ	JF1/MsJ	LG/J	MA/MyJ	NON/ShiLtJ	NZO/HlLtJ	PWK/PhJ	QSi3/Ianm	RIIIS/J	SEA/GnJ	SPRET/EiJ	ST/bJ
ss919856594	MGP_WTSI_9_63026048	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CBA/J	DBA/2J	I/LnJ	JF1/MsJ	LG/J	MA/MyJ	NON/ShiLtJ	NZO/HlLtJ	PWK/PhJ	QSi3/Ianm	RIIIS/J	SEA/GnJ	SPRET/EiJ	ST/bJ
rs579774994					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss919856594	MGP_WTSI_9_63026048	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:62933330 () rs orientation: forward

Symbol	Name	Function Class
Gm24526	predicted gene, 24526	1512 bp upstream