rs579787366 SNP Detail

Summary

• ID
  rs579787366
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13263023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTG TTTTGTTGCG GGCGGGGGGC
  G
  GGGGCGGGGG CGGGGGGCGG GGGGC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10SnJ	QSi3/Ianm	QSi5/Ianm	SJL/J
ss919142770	MGP_WTSI_8_13213023	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10SnJ	QSi3/Ianm	QSi5/Ianm	SJL/J
rs579787366					SNP	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss919142770	MGP_WTSI_8_13213023	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13263023 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	within coordinates
Rr368495	regulatory region 368495	444 bp upstream
Rr368496	regulatory region 368496	949 bp upstream
Rr659886	regulatory region 659886	within coordinates
Rr659887	regulatory region 659887	419 bp proximal
Rr659888	regulatory region 659888	1010 bp proximal
Rr659889	regulatory region 659889	1060 bp proximal