AAAGA AAGAAAGAAA GAGAGAGAGA R AGAAAGAAGA GAGAGAAAGA AAGAA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | AKR/J |
B10.RIII-H2 |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C58/J |
CBA/J |
JF1/MsJ |
MOLF/EiJ |
NZB/BlNJ |
NZO/HlLtJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss920908975 | MGP_WTSI_11_57506534 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | G | A | G | A | A | A | A | A | G | A | A | A | A |
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | AKR/J |
B10.RIII-H2 |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C58/J |
CBA/J |
JF1/MsJ |
MOLF/EiJ |
NZB/BlNJ |
NZO/HlLtJ |
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rs580752602 | SNP | G | A | G | A | A | A | A | A | G | A | A | A | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss920908975 | MGP_WTSI_11_57506534 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | A/G |
Location: Chr11:57397360 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Fam114a2 | family with sequence similarity 114, member A2 | within coordinates | ||||||
Tssr108113 | transcription start site region 108113 | 507 bp downstream | ||||||
Tssr108114 | transcription start site region 108114 | 568 bp downstream | ||||||
Tssr108115 | transcription start site region 108115 | 576 bp downstream | ||||||
Tssr108116 | transcription start site region 108116 | 595 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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