rs581037424 SNP Detail

Summary

• ID
  rs581037424
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:3050166 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTC GTTAGGTAGT GAAATATTAC
  M
  AGAAATATTG AAAAACGTGA AAAAT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	LG/J
ss922192284	MGP_WTSI_14_19419539	EVA_MGPV3	EVA_MGPV3	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	LG/J
rs581037424					SNP	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss922192284	MGP_WTSI_14_19419539	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:3050166 () rs orientation: forward

Symbol	Name	Function Class
Tssr4287	transcription start site region 4287	1996 bp upstream
Tssr4288	transcription start site region 4288	1968 bp downstream
Tssr4289	transcription start site region 4289	1873 bp upstream
Tssr4290	transcription start site region 4290	1866 bp downstream
Tssr4291	transcription start site region 4291	1786 bp upstream
Tssr4292	transcription start site region 4292	1750 bp downstream
Tssr4293	transcription start site region 4293	1715 bp upstream
Tssr4294	transcription start site region 4294	1713 bp downstream
Tssr4295	transcription start site region 4295	1640 bp upstream
Tssr4296	transcription start site region 4296	1677 bp downstream
Tssr4297	transcription start site region 4297	1613 bp upstream
Tssr4298	transcription start site region 4298	1595 bp downstream
Tssr4299	transcription start site region 4299	1555 bp downstream
Tssr4300	transcription start site region 4300	1517 bp downstream
Tssr4301	transcription start site region 4301	1499 bp upstream
Tssr4302	transcription start site region 4302	1487 bp upstream
Tssr4303	transcription start site region 4303	1432 bp downstream
Tssr4304	transcription start site region 4304	1403 bp upstream
Tssr4305	transcription start site region 4305	1334 bp downstream
Tssr4306	transcription start site region 4306	1315 bp upstream
Tssr4307	transcription start site region 4307	1294 bp downstream
Tssr4308	transcription start site region 4308	1262 bp upstream
Tssr4309	transcription start site region 4309	1218 bp upstream
Tssr4310	transcription start site region 4310	1171 bp downstream
Tssr4311	transcription start site region 4311	1143 bp upstream
Tssr4312	transcription start site region 4312	1063 bp downstream
Tssr4313	transcription start site region 4313	1004 bp upstream
Tssr4314	transcription start site region 4314	992 bp downstream
Tssr4315	transcription start site region 4315	968 bp downstream
Tssr4316	transcription start site region 4316	941 bp upstream
Tssr4317	transcription start site region 4317	865 bp downstream
Tssr4318	transcription start site region 4318	841 bp upstream
Tssr4319	transcription start site region 4319	784 bp upstream
Tssr4320	transcription start site region 4320	720 bp downstream
Tssr4321	transcription start site region 4321	692 bp upstream
Tssr4322	transcription start site region 4322	593 bp downstream
Tssr4323	transcription start site region 4323	558 bp upstream
Tssr4324	transcription start site region 4324	528 bp downstream
Tssr4325	transcription start site region 4325	477 bp downstream
Tssr4326	transcription start site region 4326	439 bp upstream
Tssr4327	transcription start site region 4327	436 bp downstream
Tssr4328	transcription start site region 4328	354 bp downstream
Tssr4329	transcription start site region 4329	356 bp upstream
Tssr4330	transcription start site region 4330	222 bp downstream
Tssr4331	transcription start site region 4331	190 bp upstream
Tssr4332	transcription start site region 4332	104 bp upstream
Tssr4333	transcription start site region 4333	85 bp downstream
Tssr4334	transcription start site region 4334	45 bp upstream
Tssr4335	transcription start site region 4335	58 bp downstream
Tssr4336	transcription start site region 4336	62 bp upstream
Tssr4337	transcription start site region 4337	135 bp downstream