rs581111756 SNP Detail

Summary

• ID
  rs581111756
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:143283657 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACAC ACACACACAC ACACACACAC
  W
  CACACACACA TGCACGTACG TACGT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S5/SvEvBrd	C3H/HeJ	C57BL/6J	CAST/EiJ	CE/J	CZECHII/EiJ	I/LnJ	JF1/MsJ	KK/HlJ	MA/MyJ	NON/ShiLtJ	NZB/BlNJ	RIIIS/J	ST/bJ	SWR/J	WSB/EiJ
ss918457276	MGP_WTSI_6_143337931	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	A	T	A	T	A	A	A	A	A	A	T	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S5/SvEvBrd	C3H/HeJ	C57BL/6J	CAST/EiJ	CE/J	CZECHII/EiJ	I/LnJ	JF1/MsJ	KK/HlJ	MA/MyJ	NON/ShiLtJ	NZB/BlNJ	RIIIS/J	ST/bJ	SWR/J	WSB/EiJ
rs581111756					SNP	T	T	T	T	A	T	A	T	A	A	A	A	A	A	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss918457276	MGP_WTSI_6_143337931	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:143283657 () rs orientation: forward

Symbol	Name	Function Class
Rr380238	regulatory region 380238	within coordinates