CATCT GCAGTACTGA AAAAAAAATG Y ATTACTTCCT TTGTACTAAC AAAAA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | C57BL/6J |
CZECHII/EiJ |
KK/HlJ |
SPRET/EiJ |
---|---|---|---|---|---|---|---|---|---|
ss914774090 | MGP_WTSI_1_85326346 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | T | T | T | C |
SNP Consensus Information | |||||||||
SNP | Consensus Type | C57BL/6J |
CZECHII/EiJ |
KK/HlJ |
SPRET/EiJ |
||||
rs581519065 | SNP | T | T | T | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss914774090 | MGP_WTSI_1_85326346 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | C/T |
Location: Chr1:85304067 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm2619 | predicted gene 2619 | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Gm16025 | predicted gene 16025 | 383 bp upstream | ||||||
Rr414357 | regulatory region 414357 | 992 bp proximal | ||||||
Tssr137 | transcription start site region 137 | 362 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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