rs581696575 SNP Detail

Summary

• ID
  rs581696575
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:71367546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAAA TCCGCCTGCC TCTGCCTCCC
  A
  AGTGCTGGGA TTAAAGGCGT GCGCC                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	CZECHII/EiJ	JF1/MsJ	LP/J	MOLF/EiJ	NOD/ShiLtJ	PL/J	RF/J	SPRET/EiJ	ST/bJ
ss921407872	MGP_WTSI_12_71320772	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	CZECHII/EiJ	JF1/MsJ	LP/J	MOLF/EiJ	NOD/ShiLtJ	PL/J	RF/J	SPRET/EiJ	ST/bJ
rs581696575					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss921407872	MGP_WTSI_12_71320772	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:71367546 () rs orientation: forward

Symbol	Name	Function Class
4930474H06Rik	RIKEN cDNA 4930474H06 gene	within coordinates
Cpgi4722	CpG island 4722	1860 bp distal
Dact1	dishevelled-binding antagonist of beta-catenin 1	665 bp downstream
Rr267971	regulatory region 267971	1946 bp distal
Rr267972	regulatory region 267972	1655 bp proximal