rs581698451 SNP Detail

Summary

• ID
  rs581698451
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:50364793 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTT CTCTTCTCTT CTCTTCTCTC
  T
  TCTCTTCTCT TCTCTTCTCT TCTCT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C58/J	CE/J	DBA/2J	FVB/NJ	LP/J	MA/MyJ	NOD/ShiLtJ	NZB/BlNJ	NZW/LacJ	PL/J	RIIIS/J	ST/bJ	ZALENDE/EiJ
ss923177795	MGP_WTSI_16_50544430	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C58/J	CE/J	DBA/2J	FVB/NJ	LP/J	MA/MyJ	NOD/ShiLtJ	NZB/BlNJ	NZW/LacJ	PL/J	RIIIS/J	ST/bJ	ZALENDE/EiJ
rs581698451					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss923177795	MGP_WTSI_16_50544430	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:50364793 () rs orientation: forward

Symbol	Name	Function Class
G730013B05Rik	RIKEN cDNA G730013B05 gene	within coordinates
Gm60707	predicted gene, 60707	within coordinates
Rr318669	regulatory region 318669	1393 bp distal
Rr323833	regulatory region 323833	1464 bp distal