rs581817431 SNP Detail

Summary

• ID
  rs581817431
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:134622378 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAGA AGTAAGGGAA GAAGGAGGAA
  K
  AGGGAGGGGG AGGGATGAGG GAGGA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	FVB/NJ	LG/J	LP/J	MA/MyJ	NON/ShiLtJ	NZO/HlLtJ	RIIIS/J	SM/J	SPRET/EiJ	SWR/J	WSB/EiJ
ss924877090	MGP_WTSI_X_135721629	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	CBA/J	CE/J	CZECHII/EiJ	DBA/2J	FVB/NJ	LG/J	LP/J	MA/MyJ	NON/ShiLtJ	NZO/HlLtJ	RIIIS/J	SM/J	SPRET/EiJ	SWR/J	WSB/EiJ
rs581817431					SNP	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss924877090	MGP_WTSI_X_135721629	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:134622378 () rs orientation: forward

Symbol	Name	Function Class
Gm61763	predicted gene, 61763	within coordinates
Tmsb15a	thymosin beta 15a	within coordinates
Tssr164175	transcription start site region 164175	988 bp upstream