CTCCC CTCCCCTCCC CTCCCCTCCC C TCCCCCTCCT TCCACTTCTT TGGTG C = C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
BTBR T<+> Itpr3 |
BUB/BnJ |
C57BL/6J |
C57BL/10SnJ |
CBA/J |
CE/J |
CZECHII/EiJ |
DBA/1J |
KK/HlJ |
MA/MyJ |
NOD/ShiLtJ |
NON/ShiLtJ |
PL/J |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
SJL/J |
SWR/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss916438071 | MGP_WTSI_3_131610051 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C |
SNP Consensus Information | |||||||||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
BTBR T<+> Itpr3 |
BUB/BnJ |
C57BL/6J |
C57BL/10SnJ |
CBA/J |
CE/J |
CZECHII/EiJ |
DBA/1J |
KK/HlJ |
MA/MyJ |
NOD/ShiLtJ |
NON/ShiLtJ |
PL/J |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
SJL/J |
SWR/J |
||||
rs581893843 | SNP | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss916438071 | MGP_WTSI_3_131610051 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | C/T |
Location: Chr3:131315812 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm42881 | predicted gene 42881 | 386 bp downstream | ||||||
Papss1 | 3'-phosphoadenosine 5'-phosphosulfate synthase 1 | within coordinates | ||||||
Rr74408 | regulatory region 74408 | 1596 bp distal | ||||||
Rr74409 | regulatory region 74409 | 31 bp distal | ||||||
Rr79284 | regulatory region 79284 | 589 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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