rs581967603 SNP Detail

Summary

• ID
  rs581967603
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:72574532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCTC TCCCTCTCCC TCTCCCTCTC
  C
  CTCTCCCTCT CCCTCTCCCT CTCCC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/10SnJ	MA/MyJ	NON/ShiLtJ	QSi3/Ianm	RIIIS/J
ss924051092	MGP_WTSI_18_72441461	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/10SnJ	MA/MyJ	NON/ShiLtJ	QSi3/Ianm	RIIIS/J
rs581967603					SNP	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss924051092	MGP_WTSI_18_72441461	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:72574532 () rs orientation: forward

Symbol	Name	Function Class
Tssr5368	transcription start site region 5368	1804 bp downstream