TCTCT TCTACCCTTT CTTTTCCTTC
Y
GTTCCTCCAC ATGCATCCCT GTGGT
Y = C/T
Note: Sequence in lower case indicates low-complexity or repetitive sequence |
| Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129P2/OlaHsd |
129S1/SvImJ |
129S5/SvEvBrd |
A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
BTBR T<+> Itpr3 |
BUB/BnJ |
C3H/HeH |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C57BR/cdJ |
C57L/J |
C58/J |
CAST/EiJ |
CBA/J |
CE/J |
CZECHII/EiJ |
DBA/1J |
DBA/2J |
FVB/NJ |
I/LnJ |
JF1/MsJ |
KK/HlJ |
LEWES/EiJ |
LG/J |
LP/J |
MA/MyJ |
MOLF/EiJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZB/BlNJ |
NZO/HlLtJ |
NZW/LacJ |
PL/J |
PWK/PhJ |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
SJL/J |
SM/J |
SPRET/EiJ |
ST/bJ |
SWR/J |
WSB/EiJ |
ZALENDE/EiJ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ss918712690 | MGP_WTSI_7_44480938 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T |
| SNP Consensus Information | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SNP | Consensus Type | 129P2/OlaHsd |
129S1/SvImJ |
129S5/SvEvBrd |
A/J |
AKR/J |
B10.RIII-H2 |
BALB/cByJ |
BALB/cJ |
BTBR T<+> Itpr3 |
BUB/BnJ |
C3H/HeH |
C3H/HeJ |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C57BR/cdJ |
C57L/J |
C58/J |
CAST/EiJ |
CBA/J |
CE/J |
CZECHII/EiJ |
DBA/1J |
DBA/2J |
FVB/NJ |
I/LnJ |
JF1/MsJ |
KK/HlJ |
LEWES/EiJ |
LG/J |
LP/J |
MA/MyJ |
MOLF/EiJ |
NOD/ShiLtJ |
NON/ShiLtJ |
NZB/BlNJ |
NZO/HlLtJ |
NZW/LacJ |
PL/J |
PWK/PhJ |
QSi3/Ianm |
QSi5/Ianm |
RF/J |
RIIIS/J |
SEA/GnJ |
SJL/J |
SM/J |
SPRET/EiJ |
ST/bJ |
SWR/J |
WSB/EiJ |
ZALENDE/EiJ |
||||
| rs582486487 | SNP | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | ||||
| Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
|---|---|---|---|---|---|---|
| ss918712690 | MGP_WTSI_7_44480938 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | C/T |
| Location: Chr7:44130362 () rs orientation: forward | ||||||||
| Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
|---|---|---|---|---|---|---|---|---|
| Rr646103 | regulatory region 646103 | 1646 bp proximal | ||||||
| Tssr2227 | transcription start site region 2227 | 1918 bp downstream | ||||||
| Tssr2228 | transcription start site region 2228 | 855 bp downstream | ||||||
| Tssr2229 | transcription start site region 2229 | 580 bp downstream | ||||||
| Tssr2230 | transcription start site region 2230 | 397 bp downstream | ||||||
| Tssr2231 | transcription start site region 2231 | 270 bp downstream | ||||||
| Tssr2232 | transcription start site region 2232 | 96 bp downstream | ||||||
| Tssr2233 | transcription start site region 2233 | 51 bp downstream | ||||||
| Tssr2234 | transcription start site region 2234 | 95 bp upstream | ||||||
| Tssr2235 | transcription start site region 2235 | 729 bp upstream | ||||||
| Tssr66293 | transcription start site region 66293 | 1992 bp downstream | ||||||
| Tssr66294 | transcription start site region 66294 | 1968 bp downstream | ||||||
| Tssr66295 | transcription start site region 66295 | 1703 bp downstream | ||||||
| Tssr66296 | transcription start site region 66296 | 1532 bp downstream | ||||||
| Tssr66297 | transcription start site region 66297 | 1508 bp downstream | ||||||
| Tssr66298 | transcription start site region 66298 | 1453 bp downstream | ||||||
| Tssr66299 | transcription start site region 66299 | 1433 bp downstream | ||||||
| Tssr66300 | transcription start site region 66300 | 1410 bp downstream | ||||||
| Tssr66301 | transcription start site region 66301 | 1394 bp downstream | ||||||
| Tssr66302 | transcription start site region 66302 | 1353 bp downstream | ||||||
| Tssr66303 | transcription start site region 66303 | 1344 bp downstream | ||||||
| Tssr66304 | transcription start site region 66304 | 1339 bp downstream | ||||||
| Tssr66305 | transcription start site region 66305 | 1300 bp downstream | ||||||
| Tssr66306 | transcription start site region 66306 | 1246 bp downstream | ||||||
| Tssr66307 | transcription start site region 66307 | 1197 bp downstream | ||||||
| Tssr66308 | transcription start site region 66308 | 1180 bp downstream | ||||||
| Tssr66309 | transcription start site region 66309 | 1130 bp downstream | ||||||
| Tssr66310 | transcription start site region 66310 | 1061 bp downstream | ||||||
| Tssr66311 | transcription start site region 66311 | 1038 bp downstream | ||||||
| Tssr66312 | transcription start site region 66312 | 1019 bp downstream | ||||||
| Tssr66313 | transcription start site region 66313 | 1009 bp downstream | ||||||
| Tssr66314 | transcription start site region 66314 | 991 bp downstream | ||||||
| Tssr66315 | transcription start site region 66315 | 984 bp downstream | ||||||
| Tssr66316 | transcription start site region 66316 | 919 bp downstream | ||||||
| Tssr66317 | transcription start site region 66317 | 903 bp downstream | ||||||
| Tssr66318 | transcription start site region 66318 | 862 bp downstream | ||||||
| Tssr66319 | transcription start site region 66319 | 834 bp downstream | ||||||
| Tssr66320 | transcription start site region 66320 | 810 bp downstream | ||||||
| Tssr66321 | transcription start site region 66321 | 786 bp downstream | ||||||
| Tssr66322 | transcription start site region 66322 | 770 bp downstream | ||||||
| Tssr66323 | transcription start site region 66323 | 732 bp downstream | ||||||
| Tssr66324 | transcription start site region 66324 | 679 bp downstream | ||||||
| Tssr66325 | transcription start site region 66325 | 638 bp downstream | ||||||
| Tssr66326 | transcription start site region 66326 | 628 bp downstream | ||||||
| Tssr66327 | transcription start site region 66327 | 608 bp downstream | ||||||
| Tssr66328 | transcription start site region 66328 | 590 bp downstream | ||||||
| Tssr66329 | transcription start site region 66329 | 551 bp downstream | ||||||
| Tssr66330 | transcription start site region 66330 | 538 bp downstream | ||||||
| Tssr66331 | transcription start site region 66331 | 524 bp downstream | ||||||
| Tssr66332 | transcription start site region 66332 | 491 bp downstream | ||||||
| Tssr66333 | transcription start site region 66333 | 456 bp downstream | ||||||
| Tssr66334 | transcription start site region 66334 | 450 bp downstream | ||||||
| Tssr66335 | transcription start site region 66335 | 439 bp downstream | ||||||
| Tssr66336 | transcription start site region 66336 | 425 bp downstream | ||||||
| Tssr66337 | transcription start site region 66337 | 409 bp downstream | ||||||
| Tssr66338 | transcription start site region 66338 | 325 bp downstream | ||||||
| Tssr66339 | transcription start site region 66339 | 293 bp downstream | ||||||
| Tssr66340 | transcription start site region 66340 | 226 bp downstream | ||||||
| Tssr66341 | transcription start site region 66341 | 177 bp downstream | ||||||
| Tssr66342 | transcription start site region 66342 | 148 bp downstream | ||||||
| Tssr66343 | transcription start site region 66343 | 122 bp downstream | ||||||
| Tssr66344 | transcription start site region 66344 | 18 bp upstream | ||||||
| Tssr66345 | transcription start site region 66345 | 51 bp upstream | ||||||
| Tssr66346 | transcription start site region 66346 | 107 bp upstream | ||||||
| Tssr66347 | transcription start site region 66347 | 145 bp upstream | ||||||
| Tssr66348 | transcription start site region 66348 | 186 bp upstream | ||||||
| Tssr66349 | transcription start site region 66349 | 210 bp upstream | ||||||
| Tssr66350 | transcription start site region 66350 | 238 bp upstream | ||||||
| Tssr66351 | transcription start site region 66351 | 246 bp upstream | ||||||
| Tssr66352 | transcription start site region 66352 | 282 bp upstream | ||||||
| Tssr66353 | transcription start site region 66353 | 356 bp upstream | ||||||
| Tssr66354 | transcription start site region 66354 | 370 bp upstream | ||||||
| Tssr66355 | transcription start site region 66355 | 397 bp upstream | ||||||
| Tssr66356 | transcription start site region 66356 | 414 bp upstream | ||||||
| Tssr66357 | transcription start site region 66357 | 428 bp upstream | ||||||
| Tssr66358 | transcription start site region 66358 | 440 bp upstream | ||||||
| Tssr66359 | transcription start site region 66359 | 466 bp upstream | ||||||
| Tssr66360 | transcription start site region 66360 | 478 bp upstream | ||||||
| Tssr66361 | transcription start site region 66361 | 504 bp upstream | ||||||
| Tssr66362 | transcription start site region 66362 | 536 bp upstream | ||||||
| Tssr66363 | transcription start site region 66363 | 553 bp upstream | ||||||
| Tssr66364 | transcription start site region 66364 | 586 bp upstream | ||||||
| Tssr66365 | transcription start site region 66365 | 606 bp upstream | ||||||
| Tssr66366 | transcription start site region 66366 | 626 bp upstream | ||||||
| Tssr66367 | transcription start site region 66367 | 654 bp upstream | ||||||
| Tssr66368 | transcription start site region 66368 | 676 bp upstream | ||||||
| Tssr66369 | transcription start site region 66369 | 710 bp upstream | ||||||
| Tssr66370 | transcription start site region 66370 | 752 bp upstream | ||||||
| Tssr66371 | transcription start site region 66371 | 1177 bp upstream | ||||||
| Tssr66372 | transcription start site region 66372 | 1340 bp upstream | ||||||
| Tssr66373 | transcription start site region 66373 | 1630 bp upstream | ||||||
| Tssr66374 | transcription start site region 66374 | 1688 bp upstream | ||||||
| Tssr66375 | transcription start site region 66375 | 1699 bp upstream | ||||||
| Tssr66376 | transcription start site region 66376 | 1712 bp upstream | ||||||
| Tssr66377 | transcription start site region 66377 | 1751 bp upstream | ||||||
| Tssr66378 | transcription start site region 66378 | 1773 bp upstream | ||||||
| Tssr66379 | transcription start site region 66379 | 1785 bp upstream | ||||||
| Tssr66380 | transcription start site region 66380 | 1818 bp upstream | ||||||
| Tssr66381 | transcription start site region 66381 | 1837 bp upstream | ||||||
| Tssr66382 | transcription start site region 66382 | 1861 bp upstream | ||||||
| Tssr66383 | transcription start site region 66383 | 1971 bp upstream | ||||||
| Tssr72201 | transcription start site region 72201 | 1987 bp upstream | ||||||
| Tssr72202 | transcription start site region 72202 | 1130 bp upstream | ||||||
| Tssr72203 | transcription start site region 72203 | 750 bp upstream | ||||||
| Tssr72204 | transcription start site region 72204 | 150 bp upstream | ||||||
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
|
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 07/22/2025 MGI 6.24 |
|
|
|
||
Analysis Tools