rs582817059 SNP Detail

Summary

• ID
  rs582817059
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110765749 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACCA GGAGGTATGA GCCAGGCAGT
  R
  GTGGCACACG GCTTTAATCT CAGCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	DBA/2J	FVB/NJ	LP/J	NOD/ShiLtJ	NZW/LacJ	QSi5/Ianm	RIIIS/J	SJL/J	SM/J	ST/bJ	SWR/J	WSB/EiJ
ss920028056	MGP_WTSI_9_110936681	EVA_MGPV3	EVA_MGPV3	f	SNP	G	A	G	G	G	G	A	A	A	A	A	A	A	G	A	G	G	A	G	G	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	DBA/2J	FVB/NJ	LP/J	NOD/ShiLtJ	NZW/LacJ	QSi5/Ianm	RIIIS/J	SJL/J	SM/J	ST/bJ	SWR/J	WSB/EiJ
rs582817059					SNP	G	A	G	G	G	G	A	A	A	A	A	A	A	G	A	G	G	A	G	G	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss920028056	MGP_WTSI_9_110936681	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110765749 () rs orientation: forward

Symbol	Name	Function Class
Rr192786	regulatory region 192786	852 bp proximal
Rr192787	regulatory region 192787	1852 bp proximal
Rr202609	regulatory region 202609	477 bp distal
Rr202610	regulatory region 202610	917 bp proximal
Rr207412	regulatory region 207412	1750 bp distal
Rr207413	regulatory region 207413	1052 bp proximal