rs582863652 SNP Detail

Summary

• ID
  rs582863652
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:108063492 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTCT CCCTCCCTCC CTCCCTCCCC
  Y
  TCTCCCTCCC TCCCTTCCTT CTTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C57BL/6J	C57BL/10SnJ	CE/J	CZECHII/EiJ	I/LnJ	MA/MyJ	NOD/ShiLtJ	NZB/BlNJ	PL/J	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	SM/J	SWR/J
ss916344861	MGP_WTSI_3_108156176	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	C	T	C	T	T	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C57BL/6J	C57BL/10SnJ	CE/J	CZECHII/EiJ	I/LnJ	MA/MyJ	NOD/ShiLtJ	NZB/BlNJ	PL/J	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	SM/J	SWR/J
rs582863652					SNP	T	T	T	T	T	T	C	T	C	T	T	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss916344861	MGP_WTSI_3_108156176	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108063492 () rs orientation: forward

Symbol	Name	Function Class
Gpr61	G protein-coupled receptor 61	1274 bp upstream
Rr583152	regulatory region 583152	1305 bp distal
Rr583153	regulatory region 583153	1139 bp distal
Rr583154	regulatory region 583154	1355 bp proximal
Rr583155	regulatory region 583155	1985 bp proximal
Tssr35129	transcription start site region 35129	1268 bp upstream