rs583577070 SNP Detail

Summary

• ID
  rs583577070
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:145410555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCTT GAACTTATTA ACCCTCTTTC
  R
  TCATTTACAT TTTATTATAT ACTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cJ	C57BL/6J	C57BR/cdJ	C57L/J	C58/J	CZECHII/EiJ	FVB/NJ	RIIIS/J	SEA/GnJ	SPRET/EiJ	ZALENDE/EiJ
ss917133278	MGP_WTSI_4_145683985	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	G	G	G	A	A	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	BALB/cJ	C57BL/6J	C57BR/cdJ	C57L/J	C58/J	CZECHII/EiJ	FVB/NJ	RIIIS/J	SEA/GnJ	SPRET/EiJ	ZALENDE/EiJ
rs583577070					SNP	A	A	G	G	G	A	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss917133278	MGP_WTSI_4_145683985	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:145410555 () rs orientation: forward

Symbol	Name	Function Class
Rr398690	regulatory region 398690	405 bp upstream
Rr398691	regulatory region 398691	1185 bp upstream
Zfp980	zinc finger protein 980	within coordinates