rs583675140 SNP Detail

Summary

• ID
  rs583675140
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:59415066 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAC CCTGAGACAT TCCTTGCTGT
  K
  GCAGCCAGTC CCTATTTCTG TCCAC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	SEA/GnJ	SM/J	WSB/EiJ	ZALENDE/EiJ
ss918788451	MGP_WTSI_7_59765318	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	T	T	T	G	G	T	G	G	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	SEA/GnJ	SM/J	WSB/EiJ	ZALENDE/EiJ
rs583675140					SNP	G	G	T	T	T	G	G	T	G	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss918788451	MGP_WTSI_7_59765318	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:59415066 () rs orientation: forward

Symbol	Name	Function Class
Del(7Ube3a-Snrpn)1Alb	Deletion, Chr 7, Beaudet 1	within coordinates
Gm22776	predicted gene, 22776	1137 bp upstream
Gm23446	predicted gene, 23446	1293 bp downstream
Snhg14	small nucleolar RNA host gene 14	within coordinates