rs583850773 SNP Detail

Summary

• ID
  rs583850773
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:19584638 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCACA CACACACACA CAAATATATA
  Y
  ATATATATAT ATATATATAT ATATA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10J	C57BR/cdJ	C58/J	CE/J	CZECHII/EiJ	DBA/1J	FVB/NJ	I/LnJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	ST/bJ	WSB/EiJ	ZALENDE/EiJ
ss923855956	MGP_WTSI_18_19451581	EVA_MGPV3	EVA_MGPV3	f	SNP	T	C	T	T	T	C	C	T	T	C	T	C	T	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10J	C57BR/cdJ	C58/J	CE/J	CZECHII/EiJ	DBA/1J	FVB/NJ	I/LnJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	ST/bJ	WSB/EiJ	ZALENDE/EiJ
rs583850773					SNP	T	C	T	T	T	C	C	T	T	C	T	C	T	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss923855956	MGP_WTSI_18_19451581	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:19584638 () rs orientation: forward

Symbol	Name	Function Class
Gm7718	predicted gene 7718	within coordinates
Rr393367	regulatory region 393367	756 bp upstream