rs584060068 SNP Detail

Summary

• ID
  rs584060068
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:76475585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAG GAGAGGAGAG GAGAGGAGAG
  R
  AGAGAAGAGA AGAGAAGAGA AGAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C3H/HeJ	C57BL/6J	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	CBA/J	DBA/1J	DBA/2J	FVB/NJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	SEA/GnJ	ST/bJ
ss924065565	MGP_WTSI_18_76342514	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C3H/HeJ	C57BL/6J	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	CBA/J	DBA/1J	DBA/2J	FVB/NJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	SEA/GnJ	ST/bJ
rs584060068					SNP	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss924065565	MGP_WTSI_18_76342514	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:76475585 () rs orientation: forward

Symbol	Name	Function Class
Rr347326	regulatory region 347326	1585 bp distal
Rr347327	regulatory region 347327	1216 bp proximal
Tssr151998	transcription start site region 151998	541 bp upstream