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rs584129350 SNP Detail
Summary
  • ID
    rs584129350
  • Variation Type
    SNP
  • Alleles
    G
Genome Location and Flanking Sequence
  • Location
    Chr12:71367515 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          TCACT CTGTAGATCA GGTTGGCCTC
    G
    AACTCAGAAA TCCGCCTGCC TCTGC                                      
    
    G = G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
AKR/J
B10.RIII-H2 H2-T18/(71NS)SnJ
BTBR T<+> Itpr3/J
C57BL/6J
C57BL/6NJ
C57BL/10J
C57BL/10SnJ
C57BR/cdJ
CAST/EiJ
CZECHII/EiJ
DBA/1J
LP/J
NOD/ShiLtJ
PL/J
PWK/PhJ
RF/J
ST/bJ
ss921407870 MGP_WTSI_12_71320741 EVA_MGPV3 EVA_MGPV3 f SNP G G G G G G G G G G G G G G G G G
SNP Consensus Information
SNP Consensus Type
AKR/J
B10.RIII-H2 H2-T18/(71NS)SnJ
BTBR T<+> Itpr3/J
C57BL/6J
C57BL/6NJ
C57BL/10J
C57BL/10SnJ
C57BR/cdJ
CAST/EiJ
CZECHII/EiJ
DBA/1J
LP/J
NOD/ShiLtJ
PL/J
PWK/PhJ
RF/J
ST/bJ
rs584129350 SNP G G G G G G G G G G G G G G G G G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss921407870 MGP_WTSI_12_71320741 SC_MOUSE_GENOMES SC_MOUSE_GENOMES f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr12:71367515 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
4930474H06Rik RIKEN cDNA 4930474H06 gene within coordinates
Cpgi4722 CpG island 4722 1829 bp distal
Dact1 dishevelled-binding antagonist of beta-catenin 1 634 bp downstream
Rr267971 regulatory region 267971 1915 bp distal
Rr267972 regulatory region 267972 1686 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory