TCACT CTGTAGATCA GGTTGGCCTC G AACTCAGAAA TCCGCCTGCC TCTGC G = G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | AKR/J |
B10.RIII-H2 |
BTBR T<+> Itpr3 |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C57BR/cdJ |
CAST/EiJ |
CZECHII/EiJ |
DBA/1J |
LP/J |
NOD/ShiLtJ |
PL/J |
PWK/PhJ |
RF/J |
ST/bJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss921407870 | MGP_WTSI_12_71320741 | EVA_MGPV3 | EVA_MGPV3 | f | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G |
SNP Consensus Information | ||||||||||||||||||||||
SNP | Consensus Type | AKR/J |
B10.RIII-H2 |
BTBR T<+> Itpr3 |
C57BL/6J |
C57BL/6NJ |
C57BL/10J |
C57BL/10SnJ |
C57BR/cdJ |
CAST/EiJ |
CZECHII/EiJ |
DBA/1J |
LP/J |
NOD/ShiLtJ |
PL/J |
PWK/PhJ |
RF/J |
ST/bJ |
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rs584129350 | SNP | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss921407870 | MGP_WTSI_12_71320741 | SC_MOUSE_GENOMES | SC_MOUSE_GENOMES | f | SNP | A/G |
Location: Chr12:71367515 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
4930474H06Rik | RIKEN cDNA 4930474H06 gene | within coordinates | ||||||
Cpgi4722 | CpG island 4722 | 1829 bp distal | ||||||
Dact1 | dishevelled-binding antagonist of beta-catenin 1 | 634 bp downstream | ||||||
Rr267971 | regulatory region 267971 | 1915 bp distal | ||||||
Rr267972 | regulatory region 267972 | 1686 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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