rs584231668 SNP Detail

Summary

• ID
  rs584231668
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:68110265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTATT GAAACTGGGG GGGGGGGAGG
  R
  GAATGGGGGG TGGAAAGAGC AACAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CAST/EiJ	CE/J	CZECHII/EiJ	I/LnJ	JF1/MsJ	MOLF/EiJ	NON/ShiLtJ	NZO/HlLtJ	PL/J	PWK/PhJ	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	WSB/EiJ	ZALENDE/EiJ
ss916172588	MGP_WTSI_3_68202932	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	A
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CAST/EiJ	CE/J	CZECHII/EiJ	I/LnJ	JF1/MsJ	MOLF/EiJ	NON/ShiLtJ	NZO/HlLtJ	PL/J	PWK/PhJ	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	WSB/EiJ	ZALENDE/EiJ
rs584231668					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss916172588	MGP_WTSI_3_68202932	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:68110265 () rs orientation: forward

Symbol	Name	Function Class
Iqschfp	Iqcj and Schip1 fusion protein	Intron
Rr577984	regulatory region 577984	1413 bp distal
Rr577985	regulatory region 577985	288 bp distal
Schip1	schwannomin interacting protein 1	Intron