rs584236726 SNP Detail

Summary

• ID
  rs584236726
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:15727562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTCA GACCTACAGT TTGCAGGATA
  T
  GCAGGAACCA GGGCCCAGCA CAATC                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	LG/J
ss917237297	MGP_WTSI_5_15522564	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	LG/J
rs584236726					SNP	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss917237297	MGP_WTSI_5_15522564	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:15727562 () rs orientation: forward

Symbol	Name	Function Class
Gm21190	predicted gene, 21190	1892 bp downstream
Gm21847	predicted gene, 21847	within coordinates
Rr607452	regulatory region 607452	1866 bp distal
Rr607453	regulatory region 607453	1962 bp distal
Rr607454	regulatory region 607454	within coordinates
Rr607455	regulatory region 607455	87 bp proximal