rs584448286 SNP Detail

Summary

• ID
  rs584448286
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148417509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGA GAGAGAGACA GAGAGAGAGA
  S
  AGAGAGAGAG AGAGAGAGAG AGAGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	C57BL/6J	C57BL/6NJ	C57BL/10J	CAST/EiJ	CZECHII/EiJ	FVB/NJ	I/LnJ	MOLF/EiJ	PL/J	SJL/J	WSB/EiJ
ss917141130	MGP_WTSI_4_148333052	EVA_MGPV3	EVA_MGPV3	f	SNP	G	C	C	C	C	C	C	C	C	G	G	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	C57BL/6J	C57BL/6NJ	C57BL/10J	CAST/EiJ	CZECHII/EiJ	FVB/NJ	I/LnJ	MOLF/EiJ	PL/J	SJL/J	WSB/EiJ
rs584448286					SNP	G	C	C	C	C	C	C	C	C	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss917141130	MGP_WTSI_4_148333052	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148417509 () rs orientation: forward

Symbol	Name	Function Class
Gm68587	predicted gene, 68587	398 bp upstream
Tssr40269	transcription start site region 40269	741 bp downstream
Tssr40270	transcription start site region 40270	427 bp upstream