rs584476107 SNP Detail

Summary

• ID
  rs584476107
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:108063437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCTC CCTCCCTCCC TCCCTCCCTC
  Y
  CTCCCTCCCT CCCTCCCTCC CTCCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10SnJ	CE/J	CZECHII/EiJ	MA/MyJ	PL/J	QSi3/Ianm	QSi5/Ianm	SJL/J
ss916344859	MGP_WTSI_3_108156121	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	T	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/10SnJ	CE/J	CZECHII/EiJ	MA/MyJ	PL/J	QSi3/Ianm	QSi5/Ianm	SJL/J
rs584476107					SNP	C	C	C	C	C	C	C	T	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss916344859	MGP_WTSI_3_108156121	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108063437 () rs orientation: forward

Symbol	Name	Function Class
Gpr61	G protein-coupled receptor 61	1219 bp upstream
Rr583152	regulatory region 583152	1250 bp distal
Rr583153	regulatory region 583153	1084 bp distal
Rr583154	regulatory region 583154	1410 bp proximal
Tssr35129	transcription start site region 35129	1213 bp upstream