rs584496918 SNP Detail

Summary

• ID
  rs584496918
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:49314860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACACA CACAGACACA CACACACACA
  T
  AGACACACAC ACACACAGAC ACACA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57L/J	CAST/EiJ	KK/HlJ	LP/J	NZB/BlNJ	NZO/HlLtJ
ss918000192	MGP_WTSI_6_49337926	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	BTBR T<+> Itpr3/J	C57BL/6J	C57BL/6NJ	C57L/J	CAST/EiJ	KK/HlJ	LP/J	NZB/BlNJ	NZO/HlLtJ
rs584496918					SNP	T	T	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss918000192	MGP_WTSI_6_49337926	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:49314860 () rs orientation: forward

Symbol	Name	Function Class
Ccdc126	coiled-coil domain containing 126	within coordinates
Rr629883	regulatory region 629883	547 bp proximal
Tssr60889	transcription start site region 60889	762 bp downstream