rs584634560 SNP Detail

Summary

• ID
  rs584634560
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:26808020 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAGG GAGGGAGGGA GGAAGGAAGG
  R
  AGGAAGGAAG GAAGGAAGGA AGGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CAST/EiJ	CE/J	JF1/MsJ	MA/MyJ	PL/J	QSi3/Ianm	SJL/J	SPRET/EiJ
ss921218865	MGP_WTSI_12_26758021	EVA_MGPV3	EVA_MGPV3	f	SNP	A	G	A	A	A	A	A	G	A	G	G	G	A	A
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	CAST/EiJ	CE/J	JF1/MsJ	MA/MyJ	PL/J	QSi3/Ianm	SJL/J	SPRET/EiJ
rs584634560					SNP	A	G	A	A	A	A	A	G	A	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss921218865	MGP_WTSI_12_26758021	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:26808020 () rs orientation: forward

Symbol	Name	Function Class
Rr259939	regulatory region 259939	820 bp distal
Rr266884	regulatory region 266884	182 bp proximal