rs584688372 SNP Detail

Summary

• ID
  rs584688372
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:92190597 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTAA AGGCCCTTGA TTGCCCTATG
  K
  TAAGTGCAGT AGCTAATGAG AACTA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	SWR/J	WSB/EiJ
ss916283691	MGP_WTSI_3_92283290	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	T	G	G	G	G	T	G	G	G	T	G	G	G	T	T	G
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BALB/cJ	C57BL/6J	CAST/EiJ	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	SWR/J	WSB/EiJ
rs584688372					SNP	G	G	T	G	G	G	G	T	G	G	G	T	G	G	G	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss916283691	MGP_WTSI_3_92283290	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92190597 () rs orientation: forward

Symbol	Name	Function Class
Rr580471	regulatory region 580471	1395 bp distal
Rr580472	regulatory region 580472	within coordinates
Rr580473	regulatory region 580473	1637 bp proximal