rs584693493 SNP Detail

Summary

• ID
  rs584693493
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:18272676 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAGG GCTTCGTGCA TTCTGGTCAG
  C
  ACCTACCAGT CCAGCAGCAT CTCTA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CE/J	DBA/1J	DBA/2J	JF1/MsJ	LEWES/EiJ	LG/J	MOLF/EiJ	NZB/BlNJ	NZW/LacJ	PWK/PhJ	SEA/GnJ	SPRET/EiJ
ss921185509	MGP_WTSI_12_18222675	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CE/J	DBA/1J	DBA/2J	JF1/MsJ	LEWES/EiJ	LG/J	MOLF/EiJ	NZB/BlNJ	NZW/LacJ	PWK/PhJ	SEA/GnJ	SPRET/EiJ
rs584693493					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss921185509	MGP_WTSI_12_18222675	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:18272676 () rs orientation: forward

Symbol	Name	Function Class
Gm40879	predicted gene, 40879	within coordinates
Rr463587	regulatory region 463587	1983 bp proximal