rs584876910 SNP Detail

Summary

• ID
  rs584876910
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:56264582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCT CCCTCCCTCC CTCCCTCCCT
  C
  CCTTCCTTCC TTCCTTCCTT CCTTC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BL/10SnJ	CAST/EiJ	CZECHII/EiJ	QSi3/Ianm	SWR/J
ss924341357	MGP_WTSI_19_56276150	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BL/10SnJ	CAST/EiJ	CZECHII/EiJ	QSi3/Ianm	SWR/J
rs584876910					SNP	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss924341357	MGP_WTSI_19_56276150	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:56264582 () rs orientation: forward

Symbol	Name	Function Class
Gm22271	predicted gene, 22271	1368 bp downstream
Gm32257	predicted gene, 32257	within coordinates
Rr549993	regulatory region 549993	1202 bp proximal
Rr549994	regulatory region 549994	1432 bp proximal
Rr549995	regulatory region 549995	1852 bp proximal
Rr549996	regulatory region 549996	1878 bp proximal
Rr549997	regulatory region 549997	1942 bp proximal