rs584938925 SNP Detail

Summary

• ID
  rs584938925
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:74059067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCT CCCTCCCTCC CTCCCTCCCT
  C
  CCTCCCTCCC TCCCTTCCTT CCTTC                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BL/10SnJ	FVB/NJ	MA/MyJ	NON/ShiLtJ	QSi3/Ianm	QSi5/Ianm	SJL/J
ss921417505	MGP_WTSI_12_74012293	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BL/10SnJ	FVB/NJ	MA/MyJ	NON/ShiLtJ	QSi3/Ianm	QSi5/Ianm	SJL/J
rs584938925					SNP	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss921417505	MGP_WTSI_12_74012293	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:74059067 () rs orientation: forward

Symbol	Name	Function Class
Rr257360	regulatory region 257360	1067 bp distal
Rr257361	regulatory region 257361	1534 bp proximal
Rr261259	regulatory region 261259	67 bp distal
Rr264147	regulatory region 264147	1100 bp distal
Syt16	synaptotagmin XVI	within coordinates