rs584961504 SNP Detail

Summary

• ID
  rs584961504
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:32246045 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTG GACAAAGAGG AAGAGAGAGG
  R
  AAGAGGGGAG AAAAGAGAGA AAGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CBA/J	CZECHII/EiJ	LEWES/EiJ	LG/J	LP/J	SJL/J	SPRET/EiJ
ss920820263	MGP_WTSI_11_32296045	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	G	A	A	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CBA/J	CZECHII/EiJ	LEWES/EiJ	LG/J	LP/J	SJL/J	SPRET/EiJ
rs584961504					SNP	A	A	A	A	A	A	A	G	A	A	A	A	A	A	A	G	A	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss920820263	MGP_WTSI_11_32296045	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:32246045 () rs orientation: forward

Symbol	Name	Function Class
Gm73808	predicted gene, 73808	79 bp downstream
Gm74521	predicted gene, 74521	443 bp downstream
Hba-a2	hemoglobin alpha, adult chain 2	444 bp upstream
Rr444568	regulatory region 444568	1918 bp distal
Rr444569	regulatory region 444569	within coordinates
Rr444570	regulatory region 444570	1251 bp proximal
Tssr100842	transcription start site region 100842	446 bp upstream
Tssr100843	transcription start site region 100843	1082 bp upstream
Tssr100844	transcription start site region 100844	1487 bp upstream