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rs585178184 SNP Detail
Summary
  • ID
    rs585178184
  • Variation Type
    SNP
  • Alleles
    A/C
Genome Location and Flanking Sequence
  • Location
    Chr13:61656174 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          GAAGG ACACATGCTC CACTATATTC
M
TAGCAGCCTT ATTTATAATA GCCAG                                      

M = A/C

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID		 Submitter
Handle		 Population
ss orientation
 Variation Type
AKR/J
B10.RIII-H2 H2-T18/(71NS)SnJ
BTBR T<+> Itpr3/J
C3H/HeJ
C57BL/6J
C57BL/6NJ
C57BL/10J
C57BL/10SnJ
C57BR/cdJ
C57L/J
C58/J
CBA/J
CE/J
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
LEWES/EiJ
LP/J
NZO/HlLtJ
PL/J
QSi5/Ianm
RF/J
SEA/GnJ
SJL/J
SPRET/EiJ
SWR/J
ss921873414 MGP_WTSI_13_61508360 EVA_MGPV3 EVA_MGPV3 f SNP C C C C C C C C C C C C C C C C C C C C C C C C C A C
SNP Consensus Information
SNP Consensus Type
AKR/J
B10.RIII-H2 H2-T18/(71NS)SnJ
BTBR T<+> Itpr3/J
C3H/HeJ
C57BL/6J
C57BL/6NJ
C57BL/10J
C57BL/10SnJ
C57BR/cdJ
C57L/J
C58/J
CBA/J
CE/J
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
LEWES/EiJ
LP/J
NZO/HlLtJ
PL/J
QSi5/Ianm
RF/J
SEA/GnJ
SJL/J
SPRET/EiJ
SWR/J
rs585178184 SNP C C C C C C C C C C C C C C C C C C C C C C C C C A C
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID		 Submitter
Handle		 Population
ss orientation
 Variation
Type		 Alleles
ss921873414 MGP_WTSI_13_61508360 SC_MOUSE_GENOMES SC_MOUSE_GENOMES f SNP A/C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr13:61656174 () rs orientation: forward
Symbol Name Transcript Protein Function
Class		 Allele Residue Codon
Position		 AA
Position
Gm47848 predicted gene, 47848 1928 bp upstream
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory