rs585248566 SNP Detail

Summary

• ID
  rs585248566
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  142
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:102366432 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAGT ATTATTATCT CCCCCCCCCC
  A
  CCCCCGCCAC TAAGTGCCTA AAGCT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	C57BL/6J	CE/J	CZECHII/EiJ	MA/MyJ	NON/ShiLtJ	PWK/PhJ	RIIIS/J	SPRET/EiJ	SWR/J
ss924749242	MGP_WTSI_X_103322826	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	C57BL/6J	CE/J	CZECHII/EiJ	MA/MyJ	NON/ShiLtJ	PWK/PhJ	RIIIS/J	SPRET/EiJ	SWR/J
rs585248566					SNP	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss924749242	MGP_WTSI_X_103322826	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:102366432 () rs orientation: forward

Symbol	Name	Function Class
Cdx4	caudal type homeobox 4	within coordinates
Cpgi22884	CpG island 22884	653 bp distal